TP 1: Connecting to the plateform
Goal : Appropriating user concepts as well as tree structure.
SelfService interface¶
Question
Consulting the SelfService interface to obtain information about your user account and/or change password.
Solution
All it takes is going to https://selfservice.bioinfo.genotoul.fr
Connect to Linux¶
Open a Linux connexion on the genotoul plateform
Please consult the corresponding help page
By replacing <username>
with your actual login, type in a terminal:
ssh -X <username>@genobioinfo.toulouse.inrae.fr
and enter your password afterwards
Who is here?¶
We are on a shared server between multiple users. Its can be verified via command line.
Question
Who else is connected simultaneously with you on the server ?
Solution
who
Where am I ?¶
Question
Once connected, where are you located within folder structure?
Solution
pwd
Read The Manual¶
Question
Display help for the command ls
Solution
man ls
My files¶
Question
List the content of your 'home directory', including hidden files. How many files do you have?
Solution
ls -a
Our tools¶
Question
List all bioinformatics programs installed into /usr/local/bioinfo/src
Solution
ls /usr/local/bioinfo/src
Our data banks¶
Question
List the set of data banks indexed for blast (/bank/blastdb
)?
Solution
ls /bank/blastdb
/home
content¶
Question
From your home directory, go to parent directory by using a relative path.
List this directory content.
Solution
cd ..
ls
Go home¶
Question
Go back to your home folder
Solution
cd
My command history¶
Question
List commands you run during this practice. Run again an old command (!command_number
)
Solution
history